Fluctuating hydrodynamics methods for dynamic coarse-grained implicit-solvent simulations in LAMMPS
DOI10.1137/15M1026390zbMATH Open1364.65172OpenAlexW2541702997MaRDI QIDQ2830581FDOQ2830581
Authors: Y. Wang, Jon Karl Sigurdsson, Paul J. Atzberger 
Publication date: 28 October 2016
Published in: SIAM Journal on Scientific Computing (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1137/15m1026390
Recommendations
- Hydrodynamic forces implemented into LAMMPS through a lattice-Boltzmann fluid
- LAMMPS lb/fluid fix version 2: improved hydrodynamic forces implemented into LAMMPS through a lattice-Boltzmann fluid
- Smoothed dissipative particle dynamics package for LAMMPS
- Algorithm Refinement for Fluctuating Hydrodynamics
- ESPResSo 3.1: Molecular Dynamics Software for Coarse-Grained Models
immersed boundary methodfluctuating hydrodynamicsimplicit solventcoarse-grainedsoft materialsstochastic eulerian Lagrangian method
Packaged methods for numerical algorithms (65Y15) Finite difference methods for initial value and initial-boundary value problems involving PDEs (65M06) Physiological flows (76Z05) Physiological flow (92C35)
Cites Work
- Fast parallel algorithms for short-range molecular dynamics
- Title not available (Why is that?)
- Analysis.
- Title not available (Why is that?)
- Title not available (Why is that?)
- Numerical Solution of the Navier-Stokes Equations
- The immersed boundary method
- Title not available (Why is that?)
- Title not available (Why is that?)
- Title not available (Why is that?)
- Ordinary differential equations. An introduction
- Stochastic reductions for inertial fluid-structure interactions subject to thermal fluctuations
- Spatially adaptive stochastic methods for fluid-structure interactions subject to thermal fluctuations in domains with complex geometries
- Stochastic Eulerian Lagrangian methods for fluid-structure interactions with thermal fluctuations
- A stochastic immersed boundary method for fluid-structure dynamics at microscopic length scales
- Mouvement Brownien d'un ellipsoide (II). Rotation libre et dépolarisation des fluorescences. Translation et diffusion de molécules ellipsoidales
- Handbook of stochastic methods for physics, chemistry and the natural sciences.
- A note on the correspondence of an immersed boundary method incorporating thermal fluctuations with Stokesian-Brownian dynamics
- Incorporating shear into stochastic Eulerian-Lagrangian methods for rheological studies of complex fluids and soft materials
Cited In (5)
- Stochastic discontinuous Galerkin methods (SDGM) based on fluctuation-dissipation balance
- Hydrodynamic flows on curved surfaces: spectral numerical methods for radial manifold shapes
- LAMMPS lb/fluid fix version 2: improved hydrodynamic forces implemented into LAMMPS through a lattice-Boltzmann fluid
- Coarse-grained methods for heterogeneous vesicles with phase-separated domains: elastic mechanics of shape fluctuations, plate compression, and channel insertion
- Hydrodynamic forces implemented into LAMMPS through a lattice-Boltzmann fluid
Uses Software
This page was built for publication: Fluctuating hydrodynamics methods for dynamic coarse-grained implicit-solvent simulations in LAMMPS
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2830581)
