Exponential time differencing for Hodgkin-Huxley-like ODEs

DOI10.1137/120883657MaRDI QIDQ2847739zbMATH OpenOpenAlexWikidataFDO

Authors C. Börgers, Alexander R. Nectow

Publication date 11 September 2013

Published in SIAM Journal on Scientific Computing (Search for Journal in Brave)

Full work available at URL http://europepmc.org/articles/pmc3779145

zbMATH Keywords

numerical examplesHodgkin-Huxley equationsstiffnessRunge-Kutta methodexponential time differencingmidpoint methodcomputational neuroscienceEuler's method

Mathematics Subject Classification ID

Neural biology (92C20) Nonlinear ordinary differential equations and systems (34A34) Finite difference and finite volume methods for ordinary differential equations (65L12) Numerical methods for initial value problems involving ordinary differential equations (65L05)

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(7)

• Exponential Adams-Bashforth integrators for stiff ODEs, application to cardiac electrophysiology
• Positive and bounded nonstandard finite difference scheme for the Hodgkin-Huxley equations
• Structure-preserving numerical integrators for Hodgkin-Huxley-type systems
• Error analysis of a specialized numerical method for mathematical models from neuroscience
• A comparison of six numerical methods for integrating a compartmental Hodgkin-Huxley type model
• A combined offline-online algorithm for Hodgkin-Huxley neural networks
• Probabilistic solvers enable a straight-forward exploration of numerical uncertainty in neuroscience models

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