Timed concurrent constraint programming for analysing biological systems

DOI10.1016/J.ENTCS.2007.05.012zbMATH Open1277.68188OpenAlexW2055481619WikidataQ57652421 ScholiaQ57652421MaRDI QIDQ2864201FDOQ2864201

Authors: Julian Gutiérrez, Jorge A. Pérez, Camilo Rueda, Frank D. Valencia 

Publication date: 6 December 2013

Published in: Electronic Notes in Theoretical Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.entcs.2007.05.012

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zbMATH Keywords

partial informationprocess calculiconcurrent constraint programming (CCP)verification of biological systems

Mathematics Subject Classification ID

Systems biology, networks (92C42) Specification and verification (program logics, model checking, etc.) (68Q60) Models and methods for concurrent and distributed computing (process algebras, bisimulation, transition nets, etc.) (68Q85)

Cites Work

• Design, implementation, and evaluation of the constraint language cc(FD)
• Formal molecular biology
• BioAmbients: an abstraction for biological compartments
• Brane Calculi
• Title not available (Why is that?)
• Computational Methods in Systems Biology
• Title not available (Why is that?)
• Taming the complexity of biochemical models through bisimulation and collapsing: theory and practice
• Decidability of infinite-state timed CCP processes and first-order LTL
• Computational methods in systems biology. International conference CMSB 2004, Paris, France, May 26--28, 2004. Revised selected papers.
• A multi-scale constraint programming model of alternative splicing regulation
• Computational Methods in Systems Biology

Cited In (5)

• Title not available (Why is that?)
• Modeling biological systems in stochastic concurrent constraint programming
• Models and emerging trends of concurrent constraint programming
• Stochastic Behavior and Explicit Discrete Time in Concurrent Constraint Programming
• Non-determinism and Probabilities in Timed Concurrent Constraint Programming

Uses Software

• cc(FD)
• Simpathica

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