Optimizing an Empirical Scoring Function for Transmembrane Protein Structure Determination

DOI10.1287/ijoc.1040.0102zbMath1239.90115OpenAlexW2113638561MaRDI QIDQ2890442

Genetha A. Gray, Ken Sale, Malin M. Young, Tamara G. Kolda

Publication date: 8 June 2012

Published in: INFORMS Journal on Computing (Search for Journal in Brave)

Full work available at URL: https://semanticscholar.org/paper/0939b46f5b2b7b2793fa33ee772b3eea63fd43ec

zbMATH Keywords

optimizationnonlinear programmingparallel algorithmcomputational biologyscoring functionprotein structure bundler

Mathematics Subject Classification ID

Applications of mathematical programming (90C90) Protein sequences, DNA sequences (92D20)

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Uses Software

• APPSPACK
• MPI/MPICH