Bayesian Inference for Contact Networks Given Epidemic Data

DOI10.1111/j.1467-9469.2010.00721.xzbMath1246.62207WikidataQ58648209 ScholiaQ58648209MaRDI QIDQ2911687

David R. Hunter, David Welch, Chris Groendyke

Publication date: 1 September 2012

Published in: Scandinavian Journal of Statistics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1111/j.1467-9469.2010.00721.x

zbMATH Keywords

measles; MCMC; Erdős-Rényi; stochastic SEIR epidemic; \texttt{R package epinet}; \texttt{R package ergm}; exponential random graph model (ERGM)

Mathematics Subject Classification ID

62-04: Software, source code, etc. for problems pertaining to statistics

92D30: Epidemiology

62P10: Applications of statistics to biology and medical sciences; meta analysis

62F15: Bayesian inference

05C90: Applications of graph theory

05C82: Small world graphs, complex networks (graph-theoretic aspects)

05C80: Random graphs (graph-theoretic aspects)

65C40: Numerical analysis or methods applied to Markov chains

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Uses Software

• R
• CRAN
• ergm

Cites Work

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• SIR dynamics in random networks with heterogeneous connectivity
• Inference for Epidemics with Three Levels of Mixing: Methodology and Application to a Measles Outbreak
• Directly Transmitted Infections Diseases: Control by Vaccination
• Goodness of Fit of Social Network Models
• The estimation of latent and infectious periods
• Bayesian Inference for Stochastic Epidemics in Populations with Random Social Structure
• Statistical inference and model selection for the 1861 Hagelloch measles epidemic
• A SIMPLE STOCHASTIC EPIDEMIC