A Variance-Components Model for Distance-Matrix Phylogenetic Reconstruction

DOI10.2202/1544-6115.1574zbMath1296.92153OpenAlexW1973662213WikidataQ46297514 ScholiaQ46297514MaRDI QIDQ2921161

Walter R. Gilks, Pietro Lio, Tom M. W. Nye

Publication date: 7 October 2014

Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc3535883

zbMATH Keywords

phylogenetic treedistance matrixvariance-components modelagglomerative methodgeneralized least-squares regression

Mathematics Subject Classification ID

General biostatistics (92B15) Genetics and epigenetics (92D10)

Uses Software

• BIONJ
• Seq-Gen

Cites Work

• Comparison of phylogenetic trees
• Data model and classification by trees; The minimum variance reduction (MVR) method
• Computing the quartet distance between evolutionary trees in time \(O(n\,\log n)\)
• On Repeated Measures Analysis with Misspecified Covariance Structure
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