Estimating the profile of the mean force potential for transmembrane transport of a water molecule by the umbrella sampling method

MaRDI QIDQ2963785zbMATH OpenFDO

Authors M. Yu. Antonov, T. V. Naumenkova, A. V. Popinako, I. N. Nikolaev, K. V. Shaitan

Publication date 21 February 2017

zbMATH Keywords

biomembranemolecular modelingumbrella sampling method

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Biophysics (92C05)

Recommendations

• MULTISCALE MODELLING OF PERMEATION THROUGH MEMBRANE CHANNELS USING PREGENERATED MOLECULAR DYNAMICS TRAJECTORIES
• Molecular dynamics simulation of membranes and a transmembrane helix
• Applying \(\text{ICC}^{\star}\) to DNA translocation: Effect of dielectric boundaries
• MD Simulation of a Phospholipid Bilayer
• Umbrella sampling in non-equilibrium computer simulations

Cited in

(2)

• MULTISCALE MODELLING OF PERMEATION THROUGH MEMBRANE CHANNELS USING PREGENERATED MOLECULAR DYNAMICS TRAJECTORIES
• Quantifying density fluctuations in volumes of all shapes and sizes using indirect umbrella sampling

This page was built for publication: Estimating the profile of the mean force potential for transmembrane transport of a water molecule by the umbrella sampling method

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2963785)