A cluster algorithm for time-course gene expression profile based on affinity propagation

DOI10.16366/J.CNKI.1000-2367.2015.06.025zbMATH Open1349.62566MaRDI QIDQ2990435FDOQ2990435

Authors: Yun Zhou, Jiucheng Xu, Cunshuan Xu 

Publication date: 10 August 2016

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zbMATH Keywords

affinity propagationgene expression prolifeinvert correlationtime-coursetransient correlation

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20)

Cited In (11)

• A multi-purpose time series data standardization method
• Clustering of short time-course gene expression data with dissimilar replicates
• Adaptive clustering for time series: application for identifying cell cycle expressed genes
• Clustering of temporal gene expression data by regularized spline regression and an energy based similarity measure
• An application of kernel methods to gene cluster temporal meta-analysis
• Cluster-based network model for time-course gene expression data
• An optimal hierarchical clustering algorithm for gene expression data
• Clustering of unevenly sampled gene expression time-series data
• A novel HMM-based clustering algorithm for the analysis of gene expression time-course data
• A novel pattern based clustering methodology for time-series microarray data
• A modified self-updating clustering algorithm for application to dengue gene expression data

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