Hidden Markov models for the stimulus-response relationships of multistate neural systems

DOI10.1162/NECO_A_00118MaRDI QIDQ3015447zbMATH OpenWikidataFDO

Authors Sean Escola, Alfredo Fontanini, Don Katz, Liam Paninski

Publication date 13 July 2011

Published in Neural Computation (Search for Journal in Brave)

Full work available at URL http://www.mitpressjournals.org/doi/abs/10.1162/NECO_a_00118

Mathematics Subject Classification ID

Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Applications of mathematical programming (90C90) Neural biology (92C20)

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Cites work

• A Maximization Technique Occurring in the Statistical Analysis of Probabilistic Functions of Markov Chains
• A spike-train probability model
• Discrete- and Continuous-Time Probabilistic Models and Algorithms for Inferring Neuronal UP and DOWN States
• Dynamic Analysis of Neural Encoding by Point Process Adaptive Filtering
• Estimating a State-Space Model from Point Process Observations
• Fitting hidden semi-Markov models to breakpoint rainfall data
• Hidden Markov modelling of simultaneously recorded cells in the associative cortex of behaving monkeys
• Monte Carlo EM Estimation for Time Series Models Involving Counts

Cited in

(16)

• A hidden Markov model for decoding and the analysis of replay in spike trains
• Attractor-state itinerancy in neural circuits with synaptic depression
• Detection of hidden structures in nonstationary spike trains
• Extracting state transition dynamics from multiple spike trains using hidden Markov models with correlated Poisson distribution
• Discrete- and Continuous-Time Probabilistic Models and Algorithms for Inferring Neuronal UP and DOWN States
• scientific article; zbMATH DE number 1928616 (Why is no real title available?)
• Estimating a State-Space Model from Point Process Observations
• Detection of bursts in extracellular spike trains using hidden semi-Markov point process models
• Estimating a separably Markov random field from binary observations
• Hidden Markov models predict the future choice better than a PSTH-based method
• An Empirical Model for Reliable Spiking Activity
• Neural ensemble states in prefrontal cortex identified using a hidden Markov model with a modified EM algorithm
• Approximate hidden semi-Markov models for dynamic connectivity analysis in resting-state fMRI
• Efficient methods for sampling spike trains in networks of coupled neurons
• Multistability in neural systems with random cross-connections
• Hidden Markov Models for Low-Frequency Earthquake Recurrence

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