Classification based on a permanental process with cyclic approximation

DOI10.1093/BIOMET/ASS047MaRDI QIDQ3143457zbMATHOpenAlexFDO

Authors Jie Yang, Klaus J. Miescke, P. McCullagh

Publication date 30 November 2012

Published in Biometrika (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1108.4920

zbMATH Keywords

high-dimensional datasupervised classificationcyclic approximationDNA microarray analysisweighted permanental ratio

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Point processes (e.g., Poisson, Cox, Hawkes processes) (60G55)

Abstract: We introduce a doubly stochastic marked point process model for supervised classification problems. Regardless of the number of classes or the dimension of the feature space, the model requires only 2--3 parameters for the covariance function. The classification criterion involves a permanental ratio for which an approximation using a polynomial-time cyclic expansion is proposed. The approximation is effective even if the feature region occupied by one class is a patchwork interlaced with regions occupied by other classes. An application to DNA microarray analysis indicates that the cyclic approximation is effective even for high-dimensional data. It can employ feature variables in an efficient way to reduce the prediction error significantly. This is critical when the true classification relies on non-reducible high-dimensional features.

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