scientific article; zbMATH DE number 5621256

MaRDI QIDQ3185253zbMATH OpenFDO

Authors Diego Prada, Jesús Gómez-Gardeñes, Pablo Echenique, Fernando Falo

Publication date 26 October 2009

zbMATH Keywords

configurational Markov networksfree-energy landscapesrandom walks

Mathematics Subject Classification ID

Dynamical aspects of statistical mechanics (37A60) Statistical thermodynamics (82B30) Random walks, random surfaces, lattice animals, etc. in equilibrium statistical mechanics (82B41) Biophysics (92C05)

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(13)

• Analysing single-molecule trajectories to reconstruct free-energy landscapes of cyclic motor proteins
• Free energy reconstruction from steered dynamics without post-processing
• Constructing and exploring wells of energy landscapes
• Modified single sweep method for reconstructing free-energy landscapes
• Metastability, conformation dynamics, and transition pathways in complex systems
• scientific article; zbMATH DE number 1962934 (Why is no real title available?)
• Metabasins -- a state space aggregation for highly disordered energy landscapes
• Archetypal landscapes for deep neural networks
• DNA Computing
• Protein energy landscapes as studied by a generalized-ensemble approach with Tsallis statistics
• Controlled dynamics on energy landscapes
• Reconstructing free energy profiles from nonequilibrium relaxation trajectories
• Comment on two distinct notions of free energy

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