Uncover context-specific gene regulation by transcription factors and micrornas using Bayesian sparse nonnegative factor regression

DOI10.1142/S0218339012400037MaRDI QIDQ3186188zbMATH OpenFDO

Authors Jia Meng, Yufei Huang, Y. Chen

Publication date 9 August 2016

Published in Journal of Biological Systems (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1142/S0218339012400037

zbMATH Keywords

gene networknonnegative factorizationtranscription factorbreak microRNAfactor regression model

Mathematics Subject Classification ID

Bayesian inference (62F15) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40)

Recommendations

• Activity of microRNAs and transcription factors in gene regulatory networks.
• Bayesian joint modeling of multiple gene networks and diverse genomic data to identify target genes of a transcription factor
• Nonparametric Bayesian learning of heterogeneous dynamic transcription factor networks
• A Bayesian graphical modeling approach to microRNA regulatory network inference
• miRNA-target gene regulatory networks: a Bayesian integrative approach to biomarker selection with application to kidney cancer

Cited in

(2)

• Prognostic factor identification by analysis of the gene expression and DNA methylation data in glioma
• Activity of microRNAs and transcription factors in gene regulatory networks.

Describes a project that uses

Uses Software

• Matlab

This page was built for publication: Uncover context-specific gene regulation by transcription factors and micrornas using Bayesian sparse nonnegative factor regression

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3186188)