Bayesian clustering of DNA sequences using Markov chains and a stochastic partition model
From MaRDI portal
Publication:3191810
DOI10.1515/sagmb-2013-0031zbMath1296.92157WikidataQ45896400 ScholiaQ45896400MaRDI QIDQ3191810
Jukka Corander, Väinö Jääskinen, Lu Cheng, Ville Parkkinen
Publication date: 7 October 2014
Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1515/sagmb-2013-0031
60J20: Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.)
92D10: Genetics and epigenetics
Uses Software
Cites Work
- Unnamed Item
- Unnamed Item
- Have I seen you before? Principles of Bayesian predictive classification revisited
- Product partition models for change point problems
- Ferguson distributions via Polya urn schemes
- Computational discovery of gene regulatory binding motifs: a Bayesian perspective
- Variable length Markov chains
- Random partition models and exchangeability for Bayesian identification of population struc\-ture
- Combinatorial stochastic processes. Ecole d'Eté de Probabilités de Saint-Flour XXXII -- 2002.
- A predictive view of Bayesian clustering
- A Bayesian analysis of some nonparametric problems
- The Nested Dirichlet Process
- Hierarchical Dirichlet Processes
- Cluster analysis of gene expression dynamics
- 10.1162/153244303321897735
- Compressed Genotyping
- Elements of Information Theory
- The Number of Partitions of a Set
- Hidden Markov models for bioinformatics
- Bayesian clustering by dynamics
- Modal clustering in a class of product partition models
- Splitting and merging components of a nonconjugate Dirichlet process mixture model
