Methods for testing association between uncertain genotypes and quantitative traits

DOI10.1093/BIOSTATISTICS/KXQ039MaRDI QIDQ3303643zbMATHOpenAlexWikidataFDO

Authors Zoltán Kutalik, Toby Johnson, Murielle Bochud, Vincent Mooser, Peter Vollenweider

Publication date 4 August 2020

Published in Biostatistics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1093/biostatistics/kxq039

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10)

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Cites work

• scientific article; zbMATH DE number 3567782 (Why is no real title available?)
• scientific article; zbMATH DE number 720689 (Why is no real title available?)
• scientific article; zbMATH DE number 3251902 (Why is no real title available?)
• Asymptotic Inference for Mixture Models by Using Data-Dependent Priors
• Estimating the dimension of a model
• Mixture Densities, Maximum Likelihood and the EM Algorithm
• Multiple hypothesis testing in microarray experiments.

Cited in

(11)

• Using linear predictors to impute allele frequencies from summary or pooled genotype data
• Generalized fiducial methods for testing quantitative trait locus effects in genetic backcross studies
• Practical consideration of genotype imputation: sample size window size, reference choice, and untyped rate
• Comparison of robust tests for genetic association analysis incorporating uncertain genotype
• Family-based association tests using genotype data with uncertainty
• A Generalized Levene's Scale Test for Variance Heterogeneity in the Presence of Sample Correlation and Group Uncertainty
• An extended Tajima's D neutrality test incorporating SNP calling and imputation uncertainties
• Genetic linkage methods for quantitative traits
• Assessing and comparison of different machine learning methods in parent-offspring trios for genotype imputation
• Uncertainties Using Genomic Information for Evidence-Based Decisions
• Operating characteristics of the rank‐based inverse normal transformation for quantitative trait analysis in genome‐wide association studies

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