PROKARYOTIC PHYLOGENY BASED ON COMPLETE GENOMES WITHOUT SEQUENCE ALIGNMENT

DOI10.1142/S0217984903004968zbMATH Open1114.92309OpenAlexW2024925477MaRDI QIDQ3368637FDOQ3368637

Authors: Ji Qi, Bailin Hao 

Publication date: 31 January 2006

Published in: Modern Physics Letters B (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1142/s0217984903004968

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zbMATH Keywords

Markov assumptionphylogenyrandom backgroundcompositional distanceprokaryote

Mathematics Subject Classification ID

Problems related to evolution (92D15)

Cites Work

• Statistically significant strings are related to regulatory elements in the promoter regions of Saccharomyces cerevisiae

Cited In (7)

• The genomic tree of living organisms based on a fractal model
• Vertical heredity vs. horizontal gene transfer: a challenge to bacterial classification
• Computational Science – ICCS 2005
• Correlation properties of the random linear high-order Markov chains
• Whole-genome prokaryotic clustering based on gene lengths
• Interrogating noise in protein sequences from the perspective of protein-protein interactions prediction
• Comparison of alignment free string distances for complete genome phylogeny

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