Piecewise deterministic Markov processes in biological models

DOI10.1007/978-3-319-12145-1_15zbMATH Open1330.60095arXiv1512.02093OpenAlexW6516488MaRDI QIDQ3460765FDOQ3460765

Authors: M. Tyran-Kamińska, Ryszard Rudnicki 

Publication date: 8 January 2016

Published in: Springer Proceedings in Mathematics & Statistics (Search for Journal in Brave)

Abstract: We present a short introduction into the framework of piecewise deterministic Markov processes. We illustrate the abstract mathematical setting with a series of examples related to dispersal of biological systems, cell cycle models, gene expression, physiologically structured populations, as well as neural activity. General results concerning asymptotic properties of stochastic semigroups induced by such Markov processes are applied to specific examples.

Full work available at URL: https://arxiv.org/abs/1512.02093

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zbMATH Keywords

partial differential equationpiecewise deterministic Markov processesbiological modelsstochastic semigroups

Mathematics Subject Classification ID

Applications of continuous-time Markov processes on discrete state spaces (60J28) Genetics and epigenetics (92D10) Markov semigroups and applications to diffusion processes (47D07) Physiological, cellular and medical topics (92C99) Population dynamics (general) (92D25) Neural biology (92C20) Continuous-time Markov processes on discrete state spaces (60J27) Cell biology (92C37) Genetics and population dynamics (92D99)

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Cited In (24)

• Title not available (Why is that?)
• Autocatalytic genetic networks modeled by piecewise-deterministic Markov processes
• The interplay between stochastic gene switching and certain metronomics therapies.
• On a stochastic gene expression with pre-mRNA, mRNA and protein contribution
• Densities for piecewise deterministic Markov processes with boundary
• Quantifying and Managing Uncertainty in Piecewise-Deterministic Markov Processes
• Asymptotic behaviour of fast diffusions on graphs
• Individually-based Markov processes modeling nonlinear systems in mathematical biology
• Existence of invariant densities for semiflows with jumps
• Piecewise deterministic processes in biological models
• A decentralized algorithm for a mean field control problem of piecewise deterministic Markov processes
• Ergodic properties of some piecewise-deterministic Markov process with application to gene expression modelling
• Some remarks on a Markov chain modelling cooperative biological systems
• Asymptotic decomposition of substochastic operators and semigroups
• Stability of stochastic semigroups and applications to Stein's neuronal model
• Nonparametric estimation of jump rates for a specific class of piecewise deterministic Markov processes
• The dynamics of enzyme inhibition controlled by piece-wise deterministic Markov process
• Piecewise-deterministic Markov processes as limits of Markov jump processes
• Bio-PEPAd: a non-Markovian extension of Bio-PEPA
• Title not available (Why is that?)
• Asymptotic decomposition of substochastic semigroups and applications
• Randomly switching evolution equations
• Probabilistic and piecewise deterministic models in biology
• Adaptive Importance Sampling Based on Fault Tree Analysis for Piecewise Deterministic Markov Process

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