SNR of DNA sequences mapped by general affine transformations of the indicator sequences

DOI10.1007/S00285-012-0564-3MaRDI QIDQ353085zbMATHOpenAlexWikidataFDO

Authors Jianfeng Shao, Xiaohua Yan, Shuo Shao

Publication date 12 July 2013

Published in Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s00285-012-0564-3

zbMATH Keywords

affine transformations3-base periodicitygene coding regions (exons)signal to noise ratio (SNR)Voss mapping

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Recommendations

• A numerical representation of DNA sequences and its applications
• Autoregressive modeling and feature analysis of DNA sequences
• A multirate DSP structure for the identification of protein-coding regions
• An efficient algorithm for prediction of genes of genomic sequences based on Fourier analysis
• The problem of power spectrum and the signal-to-noise ratio and its fast algorithm implementation in gene identification

Cites work

• Equivalence of two Fourier methods for biological sequences
• Prediction of protein coding regions by the 3-base periodicity analysis of a DNA sequence

Cited in

(1)

• A two-stage exon recognition model based on synergetic neural network

This page was built for publication: SNR of DNA sequences mapped by general affine transformations of the indicator sequences

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q353085)