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Distributed and paged suffix trees for large genetic databases

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Publication:3550828
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DOI10.1007/3-540-44888-8_6zbMATH Open1279.68066OpenAlexW1603524899MaRDI QIDQ3550828FDOQ3550828


Authors: Raphaël Clifford, Marek Sergot Edit this on Wikidata


Publication date: 6 April 2010

Published in: Combinatorial Pattern Matching (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/3-540-44888-8_6




Recommendations

  • Distributed suffix trees
  • Constructing large suffix trees on a computational grid
  • Engineering a compressed suffix tree implementation
  • Parallel construction of a suffix tree with applications
  • Database indexing for large DNA and protein sequence collections


Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Data structures (68P05) Database theory (68P15)



Cited In (6)

  • Online Suffix Tree Construction for Streaming Sequences
  • Constructing large suffix trees on a computational grid
  • Database indexing for large DNA and protein sequence collections
  • Map: searching large genome databases
  • Distributed suffix trees
  • On-line construction of compact suffix vectors and maximal repeats





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