Differentiating the protein coding and noncoding RNA segments of DNA using Shannon entropy

DOI10.1142/S0129183110014975MaRDI QIDQ3556907zbMATH OpenOpenAlexFDO

Authors Pooria Mazaheri, Amir H. Shirazi, Noushin Saeedi, Muhammad Sahimi, G. R. Jafari

Publication date 26 April 2010

Published in International Journal of Modern Physics C (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1142/s0129183110014975

zbMATH Keywords

Shannon entropyDNA sequence

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Measures of information, entropy (94A17)

Recommendations

• Segmentation of DNA into coding and noncoding regions based on recursive entropic segmentation and stop-codon statistics
• scientific article; zbMATH DE number 910859
• Entropic fluctuations in DNA sequences
• Structural complexity of DNA sequence
• Shannon, Rényie and Tsallis entropy analysis of DNA using phase plane

Cites work

• A Mathematical Theory of Communication
• Lévy statistics in coding and non-coding nucleotide sequences
• Mutual information functions versus correlation functions.
• “Metric” complexity for weakly chaotic systems

Cited in

(3)

• Segmentation of DNA into coding and noncoding regions based on recursive entropic segmentation and stop-codon statistics
• Shannon information entropy in the canonical genetic code
• In the search for the low-complexity sequences in prokaryotic and eukaryotic genomes: How to derive a coherent picture from global and local entropy measures

This page was built for publication: Differentiating the protein coding and noncoding RNA segments of DNA using Shannon entropy

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3556907)