On the sensitivity of feature ranked lists for large-scale biological data

DOI10.3934/MBE.2013.10.667zbMATH Open1268.92044OpenAlexW2323209931WikidataQ113692645 ScholiaQ113692645MaRDI QIDQ356938FDOQ356938

Authors: Danuta Gaweł, Krzysztof Fujarewicz 

Publication date: 29 July 2013

Published in: Mathematical Biosciences and Engineering (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.3934/mbe.2013.10.667

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zbMATH Keywords

sensitivityfeature selectionfeature rankingDNA microarraysgene list stabilitylarge-scale data

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10) Computational methods for problems pertaining to biology (92-08)

Cited In (4)

• A framework for list representation, enabling list stabilization through incorporation of gene exchangeabilities
• Fuzzy Gaussian lasso clustering with application to cancer data
• \texttt{TopKLists}: a comprehensive \texttt{R} package for statistical inference, stochastic aggregation, and visualization of multiple omics ranked lists
• A robust rerank approach for feature selection and its application to pooling-based GWA studies

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