Linear mixed model selection for false discovery rate control in microarray data analysis

DOI10.1111/J.1541-0420.2009.01286.XMaRDI QIDQ3576944zbMATH OpenOpenAlexWikidataFDO

Authors Cumhur Yusuf Demirkale, Dan Nettleton, Tapabrata Maiti

Publication date 3 August 2010

Published in Biometrics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1111/j.1541-0420.2009.01286.x

zbMATH Keywords

analysis of variancemethod of momentsmultiple testingrestricted maximum likelihoodSASvariance component estimation

Mathematics Subject Classification ID

Analysis of variance and covariance (ANOVA) (62J10) Paired and multiple comparisons; multiple testing (62J15) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

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Cites work

• scientific article; zbMATH DE number 720689 (Why is no real title available?)
• Order-restricted score tests for homogeneity in generalized linear and nonlinear mixed models
• Performance of the Kenward–Roger Method when the Covariance Structure is Selected Using AIC and BIC
• Random Effects Selection in Linear Mixed Models
• Regression and time series model selection in small samples
• Small Sample Inference for Fixed Effects from Restricted Maximum Likelihood
• Statistical significance for genomewide studies
• Variance component testing in generalised linear models with random effects
• Variance Components Testing in the Longitudinal Mixed Effects Model

Cited in

(5)

• What if we ignore the random effects when analyzing RNA-seq data in a multifactor experiment
• Analysis of cDNA Microarray Experiment with External Controls : A Mixed Model Approach
• Variance model selection with application to joint analysis of multiple microarray datasets under false discovery rate control
• Detecting strong signals in gene perturbation experiments: an adaptive approach with power guarantee and FDR control
• A note on joint versus gene-specific mixed model analysis of microarray gene expression data

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