Posterior analysis of rare variants in Gibbs-type species sampling models

DOI10.1016/J.JMVA.2014.06.017zbMATH Open1299.62115OpenAlexW2038671134MaRDI QIDQ406516FDOQ406516

Authors: Oriana Cesari, Stefano Favaro, Bernardo Nipoti 

Publication date: 8 September 2014

Published in: Journal of Multivariate Analysis (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jmva.2014.06.017

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zbMATH Keywords

exchangeable random partitionasymptotic credible intervalsBayesian nonparametric inferenceGibbs-type random probability measureindex of diversityrare variantsampling formulaspecies sampling problemtwo parameter Poisson-Dirichlet process

Mathematics Subject Classification ID

Bayesian inference (62F15) Nonparametric estimation (62G05) Applications of statistics to biology and medical sciences; meta analysis (62P10) Sampling theory, sample surveys (62D05) Ecology (92D40) Random measures (60G57)

Cites Work

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• Controlling the Reinforcement in Bayesian Non-Parametric Mixture Models
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• The distribution of rare alleles
• Marginals of multivariate Gibbs distributions with applications in Bayesian species sampling
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• A new estimator of the discovery probability
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Cited In (5)

• Discussion of ``On simulation and properties of the stable law by L. Devroye and L. James
• Sampling designs via a multivariate hypergeometric-Dirichlet process model for a multi-species assemblage with unknown heterogeneity
• The ubiquitous Ewens sampling formula
• Bayesian mixture models (in)consistency for the number of clusters
• Ordered and size-biased frequencies in GEM and Gibbs' models for species sampling

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