Solving a generalized distance geometry problem for protein structure determination

DOI10.1007/S11538-011-9644-6MaRDI QIDQ417280zbMATH OpenOpenAlexWikidataFDO

Authors Atilla Sit, Zhijun Wu

Publication date 14 May 2012

Published in Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s11538-011-9644-6

zbMATH Keywords

biomolecular modelingconstrained and unconstrained optimizationlinear and nonlinear systems of equationsmolecular distance geometryprotein structure determination

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) General theory of distance geometry (51K05)

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Cited in

(16)

• Geometric buildup algorithms for sensor network localization
• A geometric build-up algorithm for solving the molecular distance geometry problem with sparse distance data
• A constrained interval approach to the generalized distance geometry problem
• scientific article; zbMATH DE number 6875040 (Why is no real title available?)
• Inferential structure determination from NMR data
• An overview on protein structure determination by NMR: historical and future perspectives of the use of distance geometry methods
• Recent advances on the interval distance geometry problem
• Optimal partial discretization orders for discretizable distance geometry
• Distance geometry methods for protein structure determination
• Distance geometry in structural biology: new perspectives
• A Euclidean distance matrix model for protein molecular conformation
• Maxent-stress optimization of 3D biomolecular models
• Distance geometry problem and algorithm based on barycentric coordinates
• scientific article; zbMATH DE number 223921 (Why is no real title available?)
• Distance geometry optimization for protein structures
• Rigid versus unique determination of protein structures with geometric buildup

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• CNS

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