Comparison of stationary and oscillatory dynamics described by differential equations and Boolean maps in transcriptional regulatory circuits

DOI10.1016/J.PHYSLETA.2010.09.066MaRDI QIDQ418628zbMATH OpenOpenAlexFDO

Authors Weiming Ye, Xuhui Huang, Qinzhi Xia, Yuanyuan Mi, Runsheng Chen, Gang Hu, Pengfei Li

Publication date 29 May 2012

Published in Physics Letters. A (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.physleta.2010.09.066

zbMATH Keywords

ordinary differential equationgene regulatory networkBoolean map

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Systems biology, networks (92C42) Boundary value problems on graphs and networks for ordinary differential equations (34B45) Boolean functions (06E30)

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• Nonchaoticity of ordinary differential equations describing autonomous transcriptional regulatory circuits
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Cites work

• A methodological basis for description and analysis of systems with complex switch-like interactions
• Chaos in high-dimensional neural and gene networks
• Graphic requirements for multistability and attractive cycles in a Boolean dynamical framework
• Oscillations and multiple steady states in a cyclic gene model with repression
• Qualitative simulation of genetic regulatory networks using piecewise-linear models
• Robustness and fragility of Boolean models for genetic regulatory networks
• Self-sustained oscillations of complex genomic regulatory networks

Cited in

(2)

• The transition from differential equations to Boolean networks: A case study in simplifying a regulatory network model
• Nonchaoticity of ordinary differential equations describing autonomous transcriptional regulatory circuits

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