Dynamic cluster-scaling in DNA

DOI10.1016/J.PHYSLETA.2010.11.039MaRDI QIDQ430626zbMATH OpenOpenAlexFDO

Authors A. Bershadskii

Publication date 26 June 2012

Published in Physics Letters. A (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1008.1359

zbMATH Keywords

DNAhydrogen bondsnucleotidesstacking interactions

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

Abstract: It is shown that the nucleotide sequences in DNA molecules have cluster-scaling properties (discovered for the first time in turbulent processes: Sreenivasan and Bershadskii, 2006, J. Stat. Phys., 125, 1141-1153.). These properties are relevant to both types of nucleotide pair-bases interactions: hydrogen bonds and stacking interactions. It is shown that taking into account the cluster-scaling properties can help to improve heterogeneous models of the DNA dynamics. Two human genes: BRCA2 and NRXN1, have been considered as examples.

Recommendations

• Statistical dynamics of clustering in the genome structure
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• A dynamical approach to DNA sequences.
• Publication:4888918

Cites work

• Clustering properties in turbulent signals
• Multifractal and probabilistic properties of DNA sequences

Cited in

(3)

• Statistical dynamics of clustering in the genome structure
• Scaling behaviors of CG clusters for chromosomes
• scientific article; zbMATH DE number 919254 (Why is no real title available?)

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