Dynamic cluster-scaling in DNA

DOI10.1016/J.PHYSLETA.2010.11.039zbMATH Open1241.92021arXiv1008.1359OpenAlexW2138686031MaRDI QIDQ430626FDOQ430626

Authors: A. Bershadskii 

Publication date: 26 June 2012

Published in: Physics Letters. A (Search for Journal in Brave)

Abstract: It is shown that the nucleotide sequences in DNA molecules have cluster-scaling properties (discovered for the first time in turbulent processes: Sreenivasan and Bershadskii, 2006, J. Stat. Phys., 125, 1141-1153.). These properties are relevant to both types of nucleotide pair-bases interactions: hydrogen bonds and stacking interactions. It is shown that taking into account the cluster-scaling properties can help to improve heterogeneous models of the DNA dynamics. Two human genes: BRCA2 and NRXN1, have been considered as examples.

Full work available at URL: https://arxiv.org/abs/1008.1359

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zbMATH Keywords

DNAhydrogen bondsnucleotidesstacking interactions

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

Cites Work

• Multifractal and probabilistic properties of DNA sequences
• Clustering properties in turbulent signals

Cited In (3)

• Statistical dynamics of clustering in the genome structure
• Scaling behaviors of CG clusters for chromosomes
• Title not available (Why is that?)

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