Cost-efficiency considerations in the choice of a microarray platform for time course experimental designs

DOI10.1016/J.CSDA.2010.04.030MaRDI QIDQ452733zbMATH OpenOpenAlexFDO

Authors Valéria Lima Passos, Frans E. S. Tan, Martijn P. F. Berger

Publication date 15 September 2012

Published in Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.csda.2010.04.030

zbMATH Keywords

microarray cost-efficiencyone- and two-colour microarray designsplatform comparisonrandom intercept modeltime course experiments

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Design of statistical experiments (62K99)

Recommendations

• Design Considerations for Efficient and Effective Microarray Studies
• Optimal designs for 2-color microarray experiments
• Efficient design and analysis of two colour factorial microarray experiments
• Factorial and time course designs for cDNA microarray experiments
• Efficiency and robustness issues in complex statistical designs for two-color microarray experi\-ments.

Cites work

• Experimental Designs Optimally Balanced for Trend
• Factorial and time course designs for cDNA microarray experiments
• Near-Optimal Designs for Dual Channel Microarray Studies
• Statistical designs for two-color microarray experiments involving technical replication
• Statistical designs for two-color spotted microarray experiments

Cited in

(3)

• Cost-effective designs for trials with discrete-time survival endpoints
• The influence of a covariate on optimal designs in longitudinal studies with discrete-time survival endpoints
• D‐optimal designs for a continuous predictor in longitudinal trials with discrete‐time survival endpoints

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