Attractor controllability of Boolean networks by flipping a subset of their nodes

DOI10.1063/1.4999950MaRDI QIDQ4565983zbMATH OpenOpenAlexWikidataFDO

Authors Mohammad Reza Rafimanzelat, Fariba Bahrami

Publication date 13 June 2018

Published in Chaos: An Interdisciplinary Journal of Nonlinear Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1063/1.4999950

zbMATH Keywords

algebraic state-space representationattractor controllabilityBoolean networks (BNs), biomolecular regulatory networks

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Controllability (93B05)

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Cites work

• A Linear Representation of Dynamics of Boolean Networks
• Analysis and control of Boolean networks. A semi-tensor product approach.
• Attractor controllability of Boolean networks by flipping a subset of their nodes
• Control of Boolean networks: hardness results and algorithms for tree structured networks
• Controllability and observability of Boolean control networks
• Controllability and observability of Boolean networks arising from biology
• Controllability and optimal control of a temporal Boolean network
• Controllability of Boolean control networks avoiding states set
• Controllability of Boolean control networks via the Perron-Frobenius theory
• Controllability of Boolean control networks with impulsive effects and forbidden states
• Controllability of Boolean control networks with time delays in states
• Controllability of Boolean networks via input controls under Harvey's update scheme
• Dynamically consistent reduction of logical regulatory graphs
• Function perturbations on singular Boolean networks
• Input-state incidence matrix of Boolean control networks and its applications
• On Pinning Controllability of Boolean Control Networks
• Pinning Control for the Disturbance Decoupling Problem of Boolean Networks
• Probabilistic Boolean networks. The modeling and control of gene regulatory networks
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• Reduction of Boolean network models
• Sampled-data state feedback stabilization of Boolean control networks
• Stability and stabilization of Boolean networks
• System decomposition with respect to inputs for Boolean control networks
• The dynamics of conjunctive and disjunctive Boolean network models

Cited in

(10)

• Stabilization and set stabilization of switched Boolean control networks via flipping mechanism
• Control strategy identification via trap spaces in Boolean networks
• A node-pinning and state-flipped approach to partial synchronization of Boolean networks
• Towards the existential control of Boolean networks: a preliminary report
• Matrix-based flipping method for improving the robustness of Boolean networks
• Controllability and stabilization of Boolean control networks by the auxiliary function of flipping
• Attractor controllability of Boolean networks by flipping a subset of their nodes
• A state-flipped approach to complete synchronization of Boolean networks
• Controlling large Boolean networks with temporary and permanent perturbations
• On the number of driver nodes for controlling a Boolean network when the targets are restricted to attractors

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