Stochastic integrate and fire models: a review on mathematical methods and their applications

DOI10.1007/978-3-642-32157-3_5zbMATH Open1390.92032OpenAlexW2962963470WikidataQ105584924 ScholiaQ105584924MaRDI QIDQ4567932FDOQ4567932

Authors Maria Teresa Giraudo, Laura Sacerdote

Publication date 20 June 2018

Published in Lecture Notes in Mathematics (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1101.5539

zbMATH Keywords

integrate and fire modelsclosed forms expressions

Mathematics Subject Classification ID

Applications of Brownian motions and diffusion theory (population genetics, absorption problems, etc.) (60J70) Neural biology (92C20)

Abstract: Mathematical models are an important tool for neuroscientists. During the last thirty years many papers have appeared on single neuron description and specifically on stochastic Integrate and Fire models. Analytical results have been proved and numerical and simulation methods have been developed for their study. Reviews appeared recently collect the main features of these models but do not focus on the methodologies employed to obtain them. Aim of this paper is to fill this gap by upgrading old reviews on this topic. The idea is to collect the existing methods and the available analytical results for the most common one dimensional stochastic Integrate and Fire models to make them available for studies on networks. An effort to unify the mathematical notations is also made. This review is divided in two parts: Derivation of the models with the list of the available closed forms expressions for their characterization; Presentation of the existing mathematical and statistical methods for the study of these models.

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Cites work

• scientific article; zbMATH DE number 3835809 (Why is no real title available?)
• scientific article; zbMATH DE number 3863589 (Why is no real title available?)
• scientific article; zbMATH DE number 4003959 (Why is no real title available?)
• scientific article; zbMATH DE number 4020069 (Why is no real title available?)
• scientific article; zbMATH DE number 3736679 (Why is no real title available?)
• scientific article; zbMATH DE number 18903 (Why is no real title available?)
• scientific article; zbMATH DE number 54145 (Why is no real title available?)
• scientific article; zbMATH DE number 3555160 (Why is no real title available?)
• scientific article; zbMATH DE number 3560404 (Why is no real title available?)
• scientific article; zbMATH DE number 1165661 (Why is no real title available?)
• scientific article; zbMATH DE number 2149576 (Why is no real title available?)
• scientific article; zbMATH DE number 2149577 (Why is no real title available?)
• scientific article; zbMATH DE number 1369679 (Why is no real title available?)
• A Monte Carlo method for the simulation of first passage times of diffusion processes
• A fast algorithm for the first-passage times of Gauss-Markov processes with Hölder continuous boundaries
• A new integral equation for the evaluation of first-passage-time probability densities
• A qualitative comparison of some diffusion models for neural activity via stochastic ordering.
• A review of the integrate-and-fire neuron model: I. Homogeneous synaptic input
• A review of the integrate-and-fire neuron model: II. Inhomogeneous synaptic input and network properties
• A review of the methods for signal estimation in stochastic diffusion leaky integrate-and-fire neuronal models
• A symmetry-based constructive approach to probability densities for one-dimensional diffusion processes
• Almost sure comparisons for first passage times of diffusion processes through boundaries
• An approximate formula for the first-crossing-time density of a Wiener process perturbed by random jumps
• An improved technique for the simulation of first passage times for diffusion processes
• Asymptotic behaviour of ornstein‐uhlenbeck first‐passage‐time density through periodic boundaries
• Asymptotics of hitting probabilities for general one-dimensional pinned diffusions
• Boundary crossing of Brownian motion. Its relation to the law of the iterated logarithm and to sequential analysis
• Boundary crossing probability for Brownian motion and general boundaries
• Boundary-crossing probabilities for the Brownian motion and Poisson processes and techniques for computing the power of the Kolmogorov-Smirnov test
• Diffusion approximation and first passage time problem for a model neuron
• Diffusion approximation and first passage time problem for a model neuron. II. Outline of a computation method
• Diffusion approximation and first-passage-time problem for a model neuron. III: A birth-and-death process approach
• Diffusion approximation of the neuronal model with synaptic reversal potentials
• Estimation in discretely observed diffusions killed at a threshold
• Estimation of the input parameters in the Feller neuronal model
• Evaluation of the first-passage time probability to a square root boundary for the Wiener process
• Exponential trends of Ornstein–Uhlenbeck first-passage-time densities
• Exponential trends of first-passage-time densities for a class of diffusion processes with steady-state distribution
• FIRST PASSAGE TIME PROBLEMS AND SOME RELATED COMPUTATIONAL METHODS
• First-passage-time densities for time-non-homogeneous diffusion processes
• First-passage-time location function: application to determine first-passage-time densities in diffusion processes
• How sample paths of leaky integrate-and-fire models are influenced by the presence of a firing threshold
• Inference for the diffusion models of neuronal activity
• Interspike Interval Correlations, Memory, Adaptation, and Refractoriness in a Leaky Integrate-and-Fire Model with Threshold Fatigue
• Introduction to Theoretical Neurobiology
• Les fonctions aléatoires du type de Markoff associees à certaines équations linéaires aux dérivées partielles du type parabolique
• Limit at zero of the Brownian first-passage density
• MEAN VARIANCE AND SKEWNESS OF THE FIRST PASSAGE TIME FOR THE ORNSTEIN-UHLENBECK PROCESS
• Maximum Likelihood Decoding of Neuronal Inputs from an Interspike Interval Distribution
• Motoneuron membrane potentials follow a time inhomogeneous jump diffusion process
• Neuronal modeling in the presence of random refractoriness
• Noise induced synchronization in a neuronal oscillator
• On a set of data for the membrane potential in a neuron
• On a stochastic leaky integrate-and-fire neuronal model
• On an integral equation for first-passage-time probability densities
• On certain bounds for first-crossing-time probabilities of a jump-diffusion process
• On evaluations and asymptotic approximations of first-passage-time probabilities
• On the First Passage Time Probability Problem
• On the asymptotic behavior of the parameter estimators for some diffusion processes: application to neuronal models
• On the asymptotic behaviour of first-passage-time densities for one-dimensional diffusion processes and varying boundaries
• On the classification of experimental data modeled via a stochastic leaky integrate and fire model through boundary values
• On the comparison of Feller and Ornstein-Uhlenbeck models for neural activity
• On the discrimination problem for a class of stochastic processes with ordered first-passage times
• On the inverse first-passage-time problem for a Wiener process
• On the numerical solution of Brownian motion processes
• On the parameter estimation for diffusion models of single neuron's activities. I: Application to spontaneous activities of mesencephalic reticular formation cells in sleep and waking states
• On the solution of the Fokker–Planck equation for a Feller process
• On the transformation of diffusion equations and boundaries into the Kolmogorov equation for the Wiener process
• On the transformation of diffusion processes into the Feller process
• On the transformation of diffusion processes into the Wiener process
• Parameters of Spike Trains Observed in a Short Time Window
• Parameters of the Diffusion Leaky Integrate-and-Fire Neuronal Model for a Slowly Fluctuating Signal
• Representations of the First Hitting Time Density of an Ornstein-Uhlenbeck Process¹
• Sequential tests constructed from images
• Simplicity and Efficiency of Integrate-and-Fire Neuron Models
• Some remarks on the Rayleigh process
• Special issue on quantitative neuron modeling
• Spiking Neuron Models
• The Ornstein-Uhlenbeck neuronal model with signal-dependent noise
• The Ornstein-Uhlenbeck process as a model for neuronal activity. I. Mean and variance of the firing time
• The first-passage density of a continuous gaussian process to a general boundary
• The first-passage density of the Brownian motion process to a curved boundary
• The minimum of a stationary Markov process superimposed on a U-shaped trend
• The parameters of the stochastic leaky integrate-and-fire neuronal model
• The spatial properties of a model neuron increase its coding range

Cited in

(45)

• Reliability of signal transmission in stochastic nerve axon equations
• Fokker-Planck and Fortet equation-based parameter estimation for a leaky integrate-and-fire model with sinusoidal and stochastic forcing
• Exact simulation of the first-passage time of diffusions
• scientific article; zbMATH DE number 2149582 (Why is no real title available?)
• A review of the integrate-and-fire neuron model: I. Homogeneous synaptic input
• Statistical models of spike trains
• Path integral methods for stochastic differential equations
• Jump locations of jump-diffusion processes with state-dependent rates
• Colored noise and a stochastic fractional model for correlated inputs and adaptation in neuronal firing
• Enhancement of gamma oscillations in E/I neural networks by increase of difference between external inputs
• Weak convergence of marked point processes generated by crossings of multivariate jump processes. applications to neural network modeling
• Jacobi Processes with Jumps as Neuronal Models: A First Passage Time Analysis
• Sparse space-time models: concentration inequalities and Lasso
• A review of stochastic models of neuronal dynamics: from a single neuron to networks
• Transient dynamics of Pearson diffusions facilitates estimation of rate parameters
• On the numerical simulation of nonlinear integrate-and-fire neurons
• Exact simulation of the first passage time through a given level of jump diffusions
• Interacting Hawkes processes with multiplicative inhibition
• On transition and first hitting time densities and moments of the Ornstein-Uhlenbeck process
• On a stochastic neuronal model integrating correlated inputs
• An integrate-and-fire model to generate spike trains with long-range dependence
• An optimal Gauss-Markov approximation for a process with stochastic drift and applications
• Output stream of leaky integrate-and-fire neuron without diffusion approximation
• Some inverse Laplace transforms that contain the Marcum Q function and an expanded property of the Marcum Q function
• The stochastic FitzHugh-Nagumo neuron model in the excitable regime embeds a leaky integrate-and-fire model
• Theoretical connections between mathematical neuronal models corresponding to different expressions of noise
• The gamma renewal process as an output of the diffusion leaky integrate-and-fire neuronal model
• Reconstruction of the input signal of the leaky integrate-and-fire neuronal model from its interspike intervals
• First-passage time distribution of a Brownian motion: two unexpected journeys
• Bump Attractors and Waves in Networks of Leaky Integrate-and-Fire Neurons
• Deterministic control of SDEs with stochastic drift and multiplicative noise: a variational approach
• Large Deviations for Additive Functionals of Reflected Jump-Diffusions
• Input-output consistency in integrate and fire interconnected neurons
• Joint distribution of first exit times of a two dimensional Wiener process with jumps with application to a pair of coupled neurons
• Shot noise multifractal model for turbulent pseudo-dissipation
• Responses of leaky integrate-and-fire neurons to a plurality of stimuli in their receptive fields
• Global solvability of a networked integrate-and-fire model of McKean-Vlasov type
• Parameter inference from hitting times for perturbed Brownian motion
• A leaky integrate-and-fire model with adaptation for the generation of a spike train
• A new firing paradigm for integrate and fire stochastic neuronal models
• Approximation of the first passage time density of a Wiener process to an exponentially decaying boundary by two-piecewise linear threshold. Application to neuronal spiking activity
• Joint densities of first hitting times of a diffusion process through two time-dependent boundaries
• Synchronization of stochastic mean field networks of Hodgkin-Huxley neurons with noisy channels
• A recursion formula for the moments of the first passage time of the Ornstein-Uhlenbeck process
• The Morris-Lecar neuron model embeds a leaky integrate-and-fire model

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