Detection of differentially expressed gene sets in a partially paired microarray data set

DOI10.1515/1544-6115.1610MaRDI QIDQ458845zbMATH OpenOpenAlexWikidataFDO

Authors Johan Lim, Jayoun Kim, Sang-cheol Kim, Donghyeon Yu, Kyunga Kim, Byung Soo Kim

Publication date 8 October 2014

Published in Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1515/1544-6115.1610

zbMATH Keywords

false discovery ratemultiple testingHotelling's \(T^2\) statisticcDNA microarrayempirical null distributionpartially paired data

Mathematics Subject Classification ID

General biostatistics (92B15)

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(8)

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• Permutation test for incomplete paired data with application to cDNA microarray data
• Optimal weighted two-sample \(t\)-test with partially paired data in a unified framework
• Improving the power to detect differentially expressed genes in comparative microarray experiments by including information from self-self hybridizations
• A new framework for identifying differentially expressed genes
• ExactDAS: an exact test procedure for the detection of differential alternative splicing in microarray experiments
• A test for partial differential expression
• Two sample test for high-dimensional partially paired data

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