The minimum evolution problem in phylogenetics: polytopes, linear programming, and interpretation

DOI10.1016/B978-0-12-814066-6.00010-6zbMATH Open1409.92173MaRDI QIDQ4627744FDOQ4627744

Authors: Stefan Forcey, Gabriela Hamerlinck, Logan Keefe, William Sands 

Publication date: 11 March 2019

Published in: Algebraic and Combinatorial Computational Biology (Search for Journal in Brave)

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zbMATH Keywords

linear programmingdistance matrixbalanced minimum evolutionpolytopesphylogenetic trees

Mathematics Subject Classification ID

Linear programming (90C05) Problems related to evolution (92D15) Software, source code, etc. for problems pertaining to biology (92-04) Polytopes and polyhedra (52B99)

Cited In (2)

• Phylogenetic flexibility via Hall-type inequalities and submodularity
• Split network polytopes and network spaces

Uses Software

• polymake
• FastMe

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