A bioinformatic implementation of mutual information as a distance measure for identification of clusters of variables

DOI10.21914/ANZIAMJ.V52I0.3959MaRDI QIDQ4639249zbMATH OpenOpenAlexFDO

Authors Chris Parda, Susan R. Wilson

Publication date 8 May 2018

Published in ANZIAM Journal (Search for Journal in Brave)

Full work available at URL https://doi.org/10.21914/anziamj.v52i0.3959

zbMATH Keywords

mutual informationprobability distributionsweighted network

Mathematics Subject Classification ID

Density estimation (62G07) Applications of statistics to biology and medical sciences; meta analysis (62P10) General biostatistics (92B15) Genetics and epigenetics (92D10)

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(9)

• Interval-based distance function for identifying RNA structure candidates
• Detecting coupling directions with transcript mutual information: a comparative study
• Supervised distance matrices
• Redefinition of mutual information in the fuzzy sets framework for computational genomics
• MIC: Mutual Information Based Hierarchical Clustering
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• Measuring Distances Between Variables by Mutual Information
• Agglomerative hierarchical clustering of continuous variables based on mutual information
• MIB: using mutual information for biclustering gene expression data

Describes a project that uses

Uses Software

• R

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