Accounting for Variability in the Use of Permutation Testing to Detect Quantitative Trait Loci

DOI10.1111/J.0006-341X.2000.00052.XzbMATH Open1060.62645OpenAlexW2130324866WikidataQ47592349 ScholiaQ47592349MaRDI QIDQ4668372FDOQ4668372

Authors: Dan Nettleton, Rebecca W. Doerge 

Publication date: 19 April 2005

Published in: Biometrics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1111/j.0006-341x.2000.00052.x

Recommendations

• On some statistical aspects of the interval mapping for QTL detection
• Construction of Confidence Intervals for Quantitative Trait Loci Location in F 2 Populations
• A geometric interpretation of the permutation \(p\)-value and its application in eQTL studies
• Asymptotic test of mixture model and its applications to QTL interval mapping
• Interval Mapping of Quantitative Trait Loci through Order-Restricted Inference

zbMATH Keywords

permutation testMonte Carlo methods\(p\)-valuestatistical geneticsQTL mappingnumber of permutations

Mathematics Subject Classification ID

Nonparametric hypothesis testing (62G10) Applications of statistics to biology and medical sciences; meta analysis (62P10) Monte Carlo methods (65C05) Genetics and epigenetics (92D10) Testing in survival analysis and censored data (62N03)

Cited In (5)

• Estimation of false discovery rate using sequential permutation \(p\)-values
• Using Alpha Wisely: Improving Power to Detect Multiple QTL
• A geometric interpretation of the permutation \(p\)-value and its application in eQTL studies
• On the power to detect SNP/phenotype association in candidate quantitative trait loci genomic regions: a simulation study
• Title not available (Why is that?)

This page was built for publication: Accounting for Variability in the Use of Permutation Testing to Detect Quantitative Trait Loci

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q4668372)