Accounting for Variability in the Use of Permutation Testing to Detect Quantitative Trait Loci

DOI10.1111/J.0006-341X.2000.00052.XMaRDI QIDQ4668372zbMATH OpenOpenAlexWikidataFDO

Authors Dan Nettleton, Rebecca W. Doerge

Publication date 19 April 2005

Published in Biometrics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1111/j.0006-341x.2000.00052.x

zbMATH Keywords

\(p\)-valueMonte Carlo methodsnumber of permutationspermutation testQTL mappingstatistical genetics

Mathematics Subject Classification ID

Nonparametric hypothesis testing (62G10) Testing in survival analysis and censored data (62N03) Applications of statistics to biology and medical sciences; meta analysis (62P10) Monte Carlo methods (65C05) Genetics and epigenetics (92D10)

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(6)

• Construction of Confidence Intervals for Quantitative Trait Loci Location in F 2 Populations
• Using Alpha Wisely: Improving Power to Detect Multiple QTL
• scientific article; zbMATH DE number 819344 (Why is no real title available?)
• Estimation of false discovery rate using sequential permutation \(p\)-values
• On the power to detect SNP/phenotype association in candidate quantitative trait loci genomic regions: a simulation study
• A geometric interpretation of the permutation \(p\)-value and its application in eQTL studies

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