Links between topology of the transition graph and limit cycles in a two-dimensional piecewise affine biological model

DOI10.1007/s00285-013-0735-xzbMath1308.34058OpenAlexW2060882870WikidataQ51140022 ScholiaQ51140022MaRDI QIDQ476794

Madalena Chaves, Jean-Luc Gouzé, Wassim Abou-Jaoudé

Publication date: 2 December 2014

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s00285-013-0735-x

zbMATH Keywords

limit cyclestransition graphbiological regulatory networkspiecewise affine differential modelsstructural principles

Mathematics Subject Classification ID

Applications of graph theory (05C90) Topological structure of integral curves, singular points, limit cycles of ordinary differential equations (34C05) Deterministic network models in operations research (90B10) Paths and cycles (05C38) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10) Qualitative investigation and simulation of ordinary differential equation models (34C60) General biology and biomathematics (92B05) Systems biology, networks (92C42)

Cites Work

• Qualitative simulation of genetic regulatory networks using piecewise-linear models
• Control design for sustained oscillation in a two-gene regulatory network
• Stable oscillations in mathematical models of biological control systems
• From structure to dynamics: frequency tuning in the p53-Mdm2 network. I: Logical approach
• Structural principles for periodic orbits in Glass networks
• Geometric properties of a class of piecewise affine biological network models
• Piecewise-linear models of genetic regulatory networks: equilibria and their stability
• STRUCTURAL PRINCIPLES FOR COMPLEX DYNAMICS IN GLASS NETWORKS
• Cooperative systems of differential equations with concave nonlinearities
• Qualitative dynamics of piecewise-linear differential equations: a discrete mapping approach
• Birhythmicity, chaos, and other patterns of temporal self-organization in a multiply regulated biochemical system.
• A class of piecewise linear differential equations arising in biological models
• Periodic solutions in systems of piecewise- linear differential equations
• Limit cycles in piecewise-affine gene network models with multiple interaction loops
• A logical calculus of the ideas immanent in nervous activity
• Analysis of continuous-time switching networks
• Global dynamics of neural nets with infinite gain
• Unnamed Item
• Unnamed Item
• Unnamed Item
• Unnamed Item