Bayesian clustering of animal abundance trends for inference and dimension reduction

DOI10.1007/S13253-013-0143-0MaRDI QIDQ486040zbMATH OpenOpenAlexFDO

Authors Devin S. Johnson, Rolf R. Ream, Rod G. Towell, Michael T. Williams, Juan D. Leon Guerrero

Publication date 14 January 2015

Published in Journal of Agricultural, Biological and Environmental Statistics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s13253-013-0143-0

zbMATH Keywords

Gaussian Markov random fieldsmodel-based clusteringDirichlet process priorspatio-temporal modeldistance-dependent Chinese restaurant processecological trendsnorthern fur seal

Mathematics Subject Classification ID

Bayesian inference (62F15) Applications of statistics to environmental and related topics (62P12)

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Cites work

• A Bayesian analysis of some nonparametric problems
• Bayesian Density Estimation and Inference Using Mixtures
• Combinatorial stochastic processes. Ecole d'Eté de Probabilités de Saint-Flour XXXII -- 2002.
• Distance dependent chinese restaurant processes
• Gaussian Markov Random Fields
• Modeling Unobserved Sources of Heterogeneity in Animal Abundance Using a Dirichlet Process Prior
• Nonparametric Bayesian data analysis
• On selecting a prior for the precision parameter of Dirichlet process mixture models
• Space–Time Covariance Functions

Cited in

(3)

• Model-based simultaneous clustering and ordination of multivariate abundance data in ecology
• Modeling joint abundance of multiple species using Dirichlet process mixtures
• Bayesian mixed effects models for zero-inflated compositions in microbiome data analysis

Describes a project that uses

Uses Software

• GMRFLib
• R

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