scientific article; zbMATH DE number 841194

zbMATH Open0835.92004MaRDI QIDQ4863364FDOQ4863364

Authors Gomathi Ramachandran, Tamar Schlick 

Publication date 7 March 1996

zbMATH Keywords

hydrodynamicsparameterizationscalingmolecular dynamicsLangevin dynamicsbiopolymersmass scalingconfigurational samplingelastic- rod modelKirkwood-Riseman equationmacroscopic \(B\)-spline modelsupercoiled DNAtranslational diffusion constants

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Stochastic methods (Fokker-Planck, Langevin, etc.) applied to problems in time-dependent statistical mechanics (82C31) Computational methods for problems pertaining to biology (92-08) Biophysics (92C05)

Recommendations

• A combined wormlike-chain and bead model for dynamic simulations of long linear DNA
• An effective bead-spring model for polymer simulation
• A COUPLED MOLECULAR-CONTINUUM HYBRID MODEL FOR THE SIMULATION OF MACROMOLECULAR DYNAMICS
• Curvilinear all-atom multiscale (CAM) theory of macromolecular dynamics
• Modeling hydrodynamic interaction in Brownian dynamics: simulations of extensional flows of dilute solutions of DNA and polystyrene.

Cited in

(2)

• Curvilinear all-atom multiscale (CAM) theory of macromolecular dynamics
• A combined wormlike-chain and bead model for dynamic simulations of long linear DNA

This page was built for publication:

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q4863364)