ALIGNMENT-TO-ALIGNMENT EDITING WITH “MOVE GAP” OPERATIONS

DOI10.1142/S012905419600004XMaRDI QIDQ4888366zbMATH OpenFDO

Authors Webb Miller, Martin Fürer

Publication date 26 November 1996

Published in International Journal of Foundations of Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1142/S012905419600004X

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Combinatorics in computer science (68R05) Parallel algorithms in computer science (68W10)

Recommendations

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Cited in

(6)

• Alignment of random walks by dynamic programming
• Alignment and distribution is not (always) NP-hard
• Monge properties of sequence alignment
• Algorithmic properties of ciliate sequence alignment
• Alignments with non-overlapping moves, inversions and tandem duplications in \(O(n^{4})\) time
• Alignment between two multiple alignments

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