The SgenoLasso and its cousins for selective genotyping and extreme sampling: application to association studies and genomic selection

DOI10.1080/02331888.2021.1881785MaRDI QIDQ4987644zbMATH OpenOpenAlexFDO

Authors Céline Delmas, Charles-Elie Rabier

Publication date 3 May 2021

Published in Statistics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1080/02331888.2021.1881785

zbMATH Keywords

Gaussian processgenomic selectionhigh-dimensional linear modelselective genotypingsparsityvariable selection

Mathematics Subject Classification ID

Parametric hypothesis testing (62F03) Asymptotic properties of parametric tests (62F05) Applications of statistics to biology and medical sciences; meta analysis (62P10) General biostatistics (92B15) Genetics and epigenetics (92D10)

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Cites work

• A Model Selection Approach for the Identification of Quantitative Trait Loci in Experimental Crosses
• An asymptotic test for quantitative gene detection. (Un test asymptotique pour la detection de gènes quantitatifs)
• An asymptotic test for quantitative trait locus detection in presence of missing genotypes
• Asymptotic distribution and local power of the likelihood ratio test for mixtures: bounded and unbounded cases
• Asymptotic Distribution of the Maximum Likelihood Ratio Test for Gene Detection
• Asymptotic Statistics
• Comparing Power of Different Methods for QTL Detection
• Estimation of High Dimensional Mean Regression in the Absence of Symmetry and Light Tail Assumptions
• Global testing under sparse alternatives: ANOVA, multiple comparisons and the higher criticism
• scientific article; zbMATH DE number 845714 (Why is no real title available?)
• Level Sets and Extrema of Random Processes and Fields
• Likelihood ratio test process for quantitative trait locus detection
• Model Selection and Estimation in Regression with Grouped Variables
• On empirical processes for quantitative trait locus mapping under the presence of a selective genotyping and an interference phenomenon
• On some statistical aspects of the interval mapping for QTL detection
• On statistical inference for selective genotyping
• On stochastic processes for quantitative trait locus mapping under selective genotyping
• On the accuracy in high-dimensional linear models and its application to genomic selection
• Regularization and Variable Selection Via the Elastic Net
• Score statistics for mapping quantitative trait loci
• Statistical genetics of quantitative traits. Linkage, maps, and QTL.
• Statistics for high-dimensional data. Methods, theory and applications.
• The Bayesian Lasso
• The elements of statistical learning. Data mining, inference, and prediction
• The likelihood ratio test for general mixture models with or without structural parameter
• The statistics of gene mapping

Cited in

(3)

• The study of genomic selection methods with environmental effects
• On statistical inference for selective genotyping
• The AdaptSgenoLasso, an extended version of the SgenoLasso, for gene mapping and for genomic prediction using the extremes

Describes a project that uses

Uses Software

• QSIMVN

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