Analysis and design of molecular machines

DOI10.1016/J.TCS.2015.01.030zbMATH Open1329.68105DBLPjournals/tcs/AngioneCCLN15OpenAlexW2007057676WikidataQ59131536 ScholiaQ59131536MaRDI QIDQ498934FDOQ498934

Authors: J. Costanza, G. Carapezza, Claudio Angione, Pietro Lio, Giuseppe Nicosia 

Publication date: 29 September 2015

Published in: Theoretical Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tcs.2015.01.030

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zbMATH Keywords

Pareto optimalityPetri netsTuring machine\textit{E. coli} modellingbiological complexityflux-balance analysismolecular machineregister machinestrade-off genetic strategiesvon Neumann architectures

Mathematics Subject Classification ID

Systems biology, networks (92C42) Modes of computation (nondeterministic, parallel, interactive, probabilistic, etc.) (68Q10) Models and methods for concurrent and distributed computing (process algebras, bisimulation, transition nets, etc.) (68Q85)

Cites Work

• The computational power of Benenson automata
• Title not available (Why is that?)
• Computation with finite stochastic chemical reaction networks
• The complexity of small universal Turing machines: A survey
• From Turing machines to computer viruses
• Weak Time Petri Nets Strike Back!
• Cellular computing.
• Computation in gene networks
• Petri nets for modelling metabolic pathways: a survey
• Confusion of memory

Cited In (1)

• Metabolic pathway analysis using a Nash equilibrium approach

Uses Software

• QSSPN

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