\textit{giotto-tda}: a topological data analysis toolkit for machine learning and data exploration

MaRDI QIDQ4998924zbMATH OpenFDO

Authors Guillaume Tauzin, Umberto Lupo, Lewis C. Tunstall, Julian Burella Pérez, Matteo Caorsi, Anibal M. Medina-Mardones, Alberto Dassatti, Kathryn Hess

Publication date 9 July 2021

Full work available at URL https://arxiv.org/abs/2004.02551, https://jmlr.csail.mit.edu/papers/v22/20-325.html

zbMATH Keywords

data explorationmachine learningmapperpersistent homologytopological data analysis

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05)

Recommendations

• Topological data analysis
• Topological machine learning with persistence indicator functions
• Introduction to topological data analysis and applications
• Editorial: Topological data analysis
• A persistence landscapes toolbox for topological statistics

Cites work

• Geometry helps to compare persistence diagrams
• Scikit-learn: machine learning in Python
• Topology and data

Cited in

(24)

• Graph pseudometrics from a topological point of view
• Stitch fix for mapper and topological gains
• Decorated merge trees for persistent topology
• New formulas for cup-\(i\) products and fast computation of Steenrod squares
• Persistence Steenrod modules
• Persistence curves: a canonical framework for summarizing persistence diagrams
• The why, how, and when of representations for complex systems
• A finitely presented E_-prop. II: Cellular context
• Persistent Homology: A Topological Tool for Higher-Interaction Systems
• giotto-tda
• Sensitivity analysis of discrete preference functions using Koszul simplicial complexes
• Topological data analysis of antibody dynamics of severe and non-severe patients with COVID-19
• Signatures, Lipschitz-Free Spaces, and Paths of Persistence Diagrams
• Persistent homology of collider observations: when (w)hole matters
• Wavelet-based density estimation for persistent homology
• A node prediction algorithm with the mapper method based on dbscan and giotto-tda
• Topological data analysis of monopole current networks in U(1) lattice gauge theory
• Convolutional persistence transforms
• Short-horizon volatility spike forecasting via integrated functional and topological representations.
• G-Mapper: learning a cover in the mapper construction
• Topological data analysis for roughness surfaces of bonding assembly
• Generalized Morse theory of distance functions to surfaces for persistent homology
• Train-free segmentation in MRI with cubical persistent homology
• Any graph is a mapper graph

Describes a project that uses

Uses Software

• Dionysus
• Scikit-tda
• Ripser
• Ripser.py
• Scikit
• Gudhi
• Kepler Mapper
• pybind11
• GitHub

This page was built for publication: \textit{giotto-tda}: a topological data analysis toolkit for machine learning and data exploration

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q4998924)