Improving neural simulations with the EMI model

DOI10.1007/978-3-030-61157-6_7MaRDI QIDQ5011340zbMATH OpenOpenAlexFDO

Authors Alessio Paolo Buccino, Miroslav Kuchta, Jakob E. Schreiner, Kent-Andre Mardal

Publication date 27 August 2021

Published in Modeling Excitable Tissue (Search for Journal in Brave)

Copyright license Creative Commons Attribution 4.0 International

Full work available at URL https://doi.org/10.1007/978-3-030-61157-6_7

Mathematics Subject Classification ID

Mathematical modeling or simulation for problems pertaining to biology (92-10) Neural biology (92C20)

Recommendations

• The Role of Extracellular Conductivity Profiles in Compartmental Models for Neurons: Particulars for Layer 5 Pyramidal Cells
• Effect of morphologic features of neurons on the extracellular electric potential: a simulation study using cable theory and electro-quasi-static equations
• Fast simulation of extracellular action potential signatures based on a morphological filtering approximation
• Ephaptic interactions between neurons
• A detailed and fast model of extracellular recordings

Cites work

• Analysis and approximation of mixed-dimensional PDEs on 3D-1D domains coupled with Lagrange multipliers
• Derivation and analysis of coupled PDEs on manifolds with high dimensionality gap arising from topological model reduction
• Electrical interactions via the extracellular potential near cell bodies
• Gmsh: a 3-D finite element mesh generator with built-in pre- and post-processing facilities
• Mathematical analysis, finite element approximation and numerical solvers for the interaction of 3D reservoirs with 1D wells
• ON THE COUPLING OF 1D AND 3D DIFFUSION-REACTION EQUATIONS: APPLICATION TO TISSUE PERFUSION PROBLEMS

Cited in

(9)

• Fast simulation of extracellular action potential signatures based on a morphological filtering approximation
• MATHEMATICAL MODELING OF THE PROGRAMING FIELD IN A NEURAL SWITCH USING THE SEMI-INFINITE COPLANAR ELECTRODE APPROXIMATION
• Effect of morphologic features of neurons on the extracellular electric potential: a simulation study using cable theory and electro-quasi-static equations
• Ephaptic interactions between neurons
• Modeling excitable cells with the EMI equations: spectral analysis and iterative solution strategy
• HAZniCS -- software components for multiphysics problems
• Scalable approximation and solvers for ionic electrodiffusion in cellular geometries
• Numerical solution of mixed-dimensional PDEs using a neural preconditioner
• Dense cell-by-cell systems of PDEs: approximation, spectral analysis, and preconditioning

Describes a project that uses

Uses Software

• NeuroMorpho
• Gmsh

This page was built for publication: Improving neural simulations with the EMI model

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5011340)