Reconstruction of pairwise interactions using energy-based models*

DOI10.1088/1742-5468/AC3A7FMaRDI QIDQ5020047zbMATH OpenOpenAlexFDO

Authors Christoph Feinauer, Carlo Lucibello

Publication date 3 January 2022

Published in Journal of Statistical Mechanics: Theory and Experiment (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/2012.06625

zbMATH Keywords

computational biologyinference of graphical modelsmachine learningspin glasses

Mathematics Subject Classification ID

Statistical mechanics, structure of matter (82-XX)

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Cites work

• Analysis of Boolean Functions
• Deep learning
• Deep learning the Ising model near criticality
• Efficiency of pseudolikelihood estimation for simple Gaussian fields
• Equation of state calculations by fast computing machines
• Estimation of non-normalized statistical models by score matching
• scientific article; zbMATH DE number 4074522 (Why is no real title available?)
• Training Products of Experts by Minimizing Contrastive Divergence

Describes a project that uses

Uses Software

• BERT
• NumPy
• Tensor2Tensor
• PyTorch

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