An evaluation of a novel approach for clustering genes with dissimilar replicates

DOI10.1080/03610918.2020.1839092OpenAlexW3111931308MaRDI QIDQ5055222

Cem Iyigun, Ozan Cinar, Ozlem Ilk

Publication date: 13 December 2022

Published in: Communications in Statistics - Simulation and Computation (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1080/03610918.2020.1839092

zbMATH Keywords

clusteringreplicationcluster validationmicroarray gene expressionshort time-series

Mathematics Subject Classification ID

Statistics (62-XX)

Uses Software

• R
• PICNIC
• clustervalidation

Cites Work

• Hierarchical clustering via joint between-within distances: extending Ward's minimum variance method
• Cluster validation techniques for genome expression data
• Clustering of short time-course gene expression data with dissimilar replicates
• Clustering of unevenly sampled gene expression time-series data
• PICNIC: an algorithm to predict absolute allelic copy number variation with microarray cancer data
• Mixture of linear mixed models for clustering gene expression profiles from repeated microarray experiments
• Cluster analysis of gene expression dynamics
• Data Clustering: Theory, Algorithms, and Applications
• Encyclopedia of Distances

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