Accelerating a Gibbs sampler for variable selection on genomics data with summarization and variable pre-selection combining an array DBMS and R
DOI10.1007/S10994-015-5534-8zbMATH Open1406.62142OpenAlexW2263386644MaRDI QIDQ506436FDOQ506436
Authors: David Sergio Matusevich, Wellington Cabrera, Carlos R. Ordóñez
Publication date: 31 January 2017
Published in: Machine Learning (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1007/s10994-015-5534-8
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Linear regression; mixed models (62J05) Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20)
Cites Work
- The elements of statistical learning. Data mining, inference, and prediction
- Least angle regression. (With discussion)
- 10.1162/153244303322753616
- Title not available (Why is that?)
- Distributed optimization and statistical learning via the alternating direction method of multipliers
- High-dimensional graphs and variable selection with the Lasso
- Sure Independence Screening for Ultrahigh Dimensional Feature Space
- Sharp Thresholds for High-Dimensional and Noisy Sparsity Recovery Using $\ell _{1}$-Constrained Quadratic Programming (Lasso)
- Title not available (Why is that?)
- Mixtures of g Priors for Bayesian Variable Selection
- Title not available (Why is that?)
- Bayesian Variable Selection in Linear Regression
- High-dimensional variable selection
- A Biometrics Invited Paper. The Analysis and Selection of Variables in Linear Regression
- Consistent high-dimensional Bayesian variable selection via penalized credible regions
- Sufficient burn-in for Gibbs samplers for a hierarchical random effects model.
- Signal Recovery From Random Measurements Via Orthogonal Matching Pursuit
- Application of the alternating direction method of multipliers to separable convex programming problems
- Greed is Good: Algorithmic Results for Sparse Approximation
- Sparse Recovery With Orthogonal Matching Pursuit Under RIP
- Sparse Approximate Solutions to Linear Systems
- Variable selection in high-dimensional varying-coefficient models with global optimality
- Model selection: beyond the Bayesian/frequentist divide
- The Variable Selection Problem
- Union support recovery in multi-task learning
- Title not available (Why is that?)
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