Estimation of joint directed acyclic graphs with Lasso family for gene networks

DOI10.1080/03610918.2019.1618869MaRDI QIDQ5082742zbMATH OpenOpenAlexWikidataFDO

Authors Sung Won Han, Sung-Hoon Park, Hua Zhong, Eun-Seok Ryu, Pei Wang, Sehee Jung, Jayeon Lim, Jeewhan Yoon, SungHwan Kim

Publication date 21 June 2022

Published in Communications in Statistics. Simulation and Computation (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1080/03610918.2019.1618869

zbMATH Keywords

Bayesian networkprobabilistic graphical modelLasso estimationstructure equation modeldrug response networkunknown natural ordering

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Learning and adaptive systems in artificial intelligence (68T05) Estimation in multivariate analysis (62H12) Probabilistic graphical models (62H22) Ridge regression; shrinkage estimators (Lasso) (62J07)

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Cites work

• scientific article; zbMATH DE number 1093829 (Why is no real title available?)
• scientific article; zbMATH DE number 1134987 (Why is no real title available?)
• scientific article; zbMATH DE number 1493045 (Why is no real title available?)
• 10.1162/153244303321897717
• Causation, prediction, and search
• Distributed optimization and statistical learning via the alternating direction method of multipliers
• Estimating high-dimensional directed acyclic graphs with the PC-algorithm
• High-dimensional consistency in score-based and hybrid structure learning
• High-dimensional graphs and variable selection with the Lasso
• Joint estimation of multiple graphical models
• Joint estimation of multiple high-dimensional precision matrices
• Learning Sparse Causal Gaussian Networks With Experimental Intervention: Regularization and Coordinate Descent
• Model selection and estimation in the Gaussian graphical model
• Network exploration via the adaptive LASSO and SCAD penalties
• Penalized likelihood methods for estimation of sparse high-dimensional directed acyclic graphs
• Sparse inverse covariance estimation with the graphical lasso
• Sparse permutation invariant covariance estimation
• The Adaptive Lasso and Its Oracle Properties
• The Joint Graphical Lasso for Inverse Covariance Estimation Across Multiple Classes
• The max-min hill-climbing Bayesian network structure learning algorithm

Cited in

(3)

• Joint skeleton estimation of multiple directed acyclic graphs for heterogeneous population
• Estimation of directed subnetworks in ultra-high dimensional data for gene network problems
• Joint estimation of multiple dependent Gaussian graphical models with applications to mouse genomics

Describes a project that uses

Uses Software

• TETRAD
• glasso

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