Shrinkage clustering: a fast and size-constrained algorithm for biomedical applications

DOI10.4230/LIPICS.WABI.2017.11MaRDI QIDQ5111805zbMATH OpenOpenAlexFDO

Authors Chenyue W. Hu, Hanyang Li, Amina A. Qutub

Publication date 27 May 2020

Full work available at URL https://doi.org/10.4230/LIPIcs.WABI.2017.11

zbMATH Keywords

clusteringmatrix factorizationgene expressioncancer subtyping

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Medical applications (general) (92C50)

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Cites work

• scientific article; zbMATH DE number 194758 (Why is no real title available?)
• scientific article; zbMATH DE number 3340881 (Why is no real title available?)
• Breast Cancer Diagnosis and Prognosis Via Linear Programming
• Clustering by passing messages between data points
• Consensus clustering: A resampling-based method for class discovery and visualization of gene expression microarray data
• Estimating the number of clusters in a data set via the gap statistic
• Hierarchical clustering schemes
• Introduction to Information Retrieval
• Silhouettes: a graphical aid to the interpretation and validation of cluster analysis
• Stability-Based Validation of Clustering Solutions

Describes a project that uses

Uses Software

• Silhouettes
• UCI
• cluster (R)
• Kernlab
• apcluster
• APCluster

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