Improved De Novo Peptide Sequencing using LC Retention Time Information

DOI10.4230/LIPICS.WABI.2017.26MaRDI QIDQ5111838zbMATH OpenOpenAlexFDO

Authors Yves Frank, Tomas Hruz, Thomas Tschager, Valentin Venzin

Publication date 27 May 2020

Full work available at URL https://www.research-collection.ethz.ch/bitstream/20.500.11850/212459/1/LIPIcs-WABI-2017-26.pdf

zbMATH Keywords

computational proteomicsde novo peptide sequencingmass spectrometrypeptide identificationretention time prediction

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Protein sequences, DNA sequences (92D20)

Recommendations

• scientific article; zbMATH DE number 1445327
• An effective algorithm for peptide \textit{de novo} sequencing from MS/MS spectra
• An effective algorithm for the peptide \textit{de novo} sequencing from MS/MS spectrum
• Peptide sequencing via graph path decomposition

Cites work

• A better scoring model for de novo peptide sequencing: the symmetric difference between explained and measured masses
• scientific article; zbMATH DE number 1445327 (Why is no real title available?)

Cited in

(2)

• scientific article; zbMATH DE number 1445327 (Why is no real title available?)
• Constrained De Novo Sequencing of neo-Epitope Peptides Using Tandem Mass Spectrometry

Describes a project that uses

Uses Software

• UniNovo
• Comet

This page was built for publication: Improved De Novo Peptide Sequencing using LC Retention Time Information

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5111838)