A Crump-Mode-Jagers branching process model of prion loss in yeast

DOI10.1239/JAP/1402578636MaRDI QIDQ5169737zbMATHOpenAlexFDO

Authors Peter Olofsson, Suzanne S. Sindi

Publication date 11 July 2014

Published in Journal of Applied Probability (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1239/jap/1402578636

zbMATH Keywords

branching processyeastprion

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Applications of branching processes (60J85) Stochastic processes (60G99)

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Cites work

• Budding Yeast, Branching Processes, and Generalized Fibonacci Numbers
• Estimating the number of prions in yeast cells
• Introducing Monte Carlo Methods with R
• Kinetic models of guanidine hydrochloride-induced curing of the yeast \([\mathrm{PSI}^+]\) prion
• Modelling yeast cell growth using stochastic branching processes
• Models for yeast prions
• The growth and composition of branching populations

Cited in

(13)

• Computational methods for yeast prion curing curves
• Estimating the rate of prion aggregate amplification in yeast with a generation and structured population model
• On analytical and numerical approaches to division and label structured population models
• A mathematical model of the dynamics of prion aggregates with chaperone-mediated fragmentation
• Models for yeast prions
• Research in Computational Molecular Biology
• A Discrete-Time Branching Process Model of Yeast Prion Curing Curves*
• Aggregate data and the Prohorov metric framework: efficient gradient computation
• Kinetic models of guanidine hydrochloride-induced curing of the yeast \([\mathrm{PSI}^+]\) prion
• Central limit theorem for supercritical binary homogeneous Crump-Mode-Jagers processes
• Estimating the number of prions in yeast cells
• Asymptotic fluctuations in supercritical Crump-Mode-Jagers processes
• [\textit{PSI}]-CIC: a deep-learning pipeline for the annotation of sectored \textit{saccharomyces cerevisiae} colonies

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