A geometric approach to pairwise Bayesian alignment of functional data using importance sampling
From MaRDI portal
(Redirected from Publication:521311)
Abstract: We present a Bayesian model for pairwise nonlinear registration of functional data. We use the Riemannian geometry of the space of warping functions to define appropriate prior distributions and sample from the posterior using importance sampling. A simple square-root transformation is used to simplify the geometry of the space of warping functions, which allows for computation of sample statistics, such as the mean and median, and a fast implementation of a -means clustering algorithm. These tools allow for efficient posterior inference, where multiple modes of the posterior distribution corresponding to multiple plausible alignments of the given functions are found. We also show pointwise credible intervals to assess the uncertainty of the alignment in different clusters. We validate this model using simulations and present multiple examples on real data from different application domains including biometrics and medicine.
Recommendations
- Bayesian Curve Registration of Functional Data
- Bayesian Framework for Simultaneous Registration and Estimation of Noisy, Sparse, and Fragmented Functional Data
- A differential geometric approach to statistical inference on the basis of contrast functionals
- Bayesian nonparametric functional data analysis through density estimation
- Bayesian estimation of principal components for functional data
- Bayesian nonparametric modeling for functional analysis of variance
- Efficient Bayesian hierarchical functional data analysis with basis function approximations using Gaussian-Wishart processes
- A Bayesian method for simultaneous registration and clustering of functional observations
- Some recent developments in inference for geostatistical functional data
- A geometric approach for computing tolerance bounds for elastic functional data
Cited in
(20)- Multimodal Bayesian registration of noisy functions using Hamiltonian Monte Carlo
- Geometric sensitivity measures for Bayesian nonparametric density estimation models
- Bayesian analysis of curves shape variation through registration and regression
- Biomedical applications of geometric functional data analysis
- Analysis of proteomics data: Bayesian alignment of functions
- Elastic functional principal component regression
- A geometric approach for computing tolerance bounds for elastic functional data
- scientific article; zbMATH DE number 7626765 (Why is no real title available?)
- Simplifying transforms for general elastic metrics on the space of plane curves
- Distribution on warp maps for alignment of open and closed curves
- A geometric variational approach to Bayesian inference
- Bayesian registration of functions and curves
- Automatic detection and uncertainty quantification of landmarks on elastic curves
- A Riemann manifold model framework for longitudinal changes in physical activity patterns
- Comments on: ``Shape-based functional data analysis
- A stochastic process representation for time warping functions
- Analysis of shape data: from landmarks to elastic curves
- Elastic functional changepoint detection of climate impacts from localized sources
- Object oriented data analysis of surface motion time series in peatland landscapes
- A new framework for Bayesian function registration
This page was built for publication: A geometric approach to pairwise Bayesian alignment of functional data using importance sampling
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q521311)