Flexible statistical modelling of the occurrences of transcription factor binding sites along a DNA sequence
DOI10.17654/AS053060659zbMATH Open1422.62185OpenAlexW2904520045WikidataQ128746246 ScholiaQ128746246MaRDI QIDQ5229486FDOQ5229486
Authors: Gabriel Kallah-Dagadu, B. K. Nkansah, Nathaniel K. Howard 
Publication date: 15 August 2019
Published in: Advances and Applications in Statistics (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.17654/as053060659
Recommendations
- A transdimensional Bayesian model for pattern recognition in DNA sequences
- FADO: A Statistical Method to Detect Favored or Avoided Distances between Occurrences of Motifs using the Hawkes' Model
- A statistical model for investigating binding probabilities of DNA nucleotide sequences using microarrays
- Transcription factor binding site prediction with multivariate gene expression data
- Heterogeneity in DNA multiple alignments: modeling, inference, and applications in motif finding
point processesmultivariate Hawkes modelinteraction among transcription factorstranscription factors binding sites
Applications of statistics to biology and medical sciences; meta analysis (62P10) Estimation in multivariate analysis (62H12) Protein sequences, DNA sequences (92D20)
Cites Work
- An Introduction to the Theory of Point Processes
- Spectra of some self-exciting and mutually exciting point processes
- Title not available (Why is that?)
- Multivariate Hawkes processes: an application to financial data
- Adaptive estimation for Hawkes processes; application to genome analysis
- Lasso and probabilistic inequalities for multivariate point processes
- Stability of nonlinear Hawkes processes
- Transforming spatial point processes into Poisson processes
- Econometrics of financial high-frequency data
- Exact distribution of word occurrences in a random sequence of letters
- FADO: A Statistical Method to Detect Favored or Avoided Distances between Occurrences of Motifs using the Hawkes' Model
- The intersite distances between pattern occurrences in strings generated by general discrete- and continuous-time models: an algorithmic approach
Cited In (6)
- A statistical model for investigating binding probabilities of DNA nucleotide sequences using microarrays
- Bayesian Clustering of Transcription Factor Binding Motifs
- Probabilistic graphical modelling of causal effects among the occurrences of transcription factors in DNA sequence
- Statistical inference for DNA sequences of promoters: a non-stationary qualitative model
- Reference point logistic regression and the identification of DNA functional sites
- FADO: A Statistical Method to Detect Favored or Avoided Distances between Occurrences of Motifs using the Hawkes' Model
Uses Software
This page was built for publication: Flexible statistical modelling of the occurrences of transcription factor binding sites along a DNA sequence
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5229486)
