Absorption of Markov chains. Application to Fu algorithm in genomics

MaRDI QIDQ5262072zbMATHFDO

Authors Bernard Prum

Publication date 13 July 2015

Full work available at URL http://journal-sfds.fr/article/view/120/

zbMATH Keywords

exceptional wordsabsorption of Markov chainsFu algorithm

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20) Markov chains (discrete-time Markov processes on discrete state spaces) (60J10)

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(4)

• A note on repeated sequences in Markov chains
• Markov renewal processes, counters and repeated sequences in Markov chains
• Large deviations and full Edgeworth expansions for finite Markov chains with applications to the analysis of genomic sequences
• Asymptotic properties of words in semi-Markov sequences

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